Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Raet1aO08602 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Raet1aO08602 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Raet1aO08602 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Raet1aO08602 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Raet1aO08602 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Raet1aO08602 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.75■□□□□ 0.11
Raet1aO08602 Gm4968-201ENSMUST00000071458 858 ntBASIC15.75■□□□□ 0.11
Raet1aO08602 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Raet1aO08602 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Raet1aO08602 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.74■□□□□ 0.11
Raet1aO08602 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.74■□□□□ 0.11
Raet1aO08602 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.74■□□□□ 0.11
Raet1aO08602 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Raet1aO08602 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Raet1aO08602 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Raet1aO08602 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.73■□□□□ 0.11
Raet1aO08602 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.73■□□□□ 0.11
Raet1aO08602 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 Idnk-204ENSMUST00000226010 1898 ntBASIC15.73■□□□□ 0.11
Raet1aO08602 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Raet1aO08602 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Raet1aO08602 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Raet1aO08602 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.72■□□□□ 0.11
Raet1aO08602 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Mtag2-201ENSMUST00000058665 714 ntBASIC15.72■□□□□ 0.11
Raet1aO08602 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Raet1aO08602 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Raet1aO08602 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.72■□□□□ 0.11
Raet1aO08602 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.72■□□□□ 0.11
Raet1aO08602 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Raet1aO08602 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.72■□□□□ 0.11
Raet1aO08602 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Raet1aO08602 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Raet1aO08602 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Raet1aO08602 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Raet1aO08602 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Raet1aO08602 Dio3-201ENSMUST00000097228 1449 ntBASIC15.71■□□□□ 0.11
Raet1aO08602 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Raet1aO08602 Gm12896-201ENSMUST00000118430 226 ntBASIC15.71■□□□□ 0.11
Raet1aO08602 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Raet1aO08602 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Raet1aO08602 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Raet1aO08602 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Raet1aO08602 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.71■□□□□ 0.1
Raet1aO08602 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms