Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec22bO08547 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec22bO08547 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sec22bO08547 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec22bO08547 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sec22bO08547 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec22bO08547 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.56■□□□□ 0.4
Sec22bO08547 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Sec22bO08547 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.56■□□□□ 0.4
Sec22bO08547 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Sec22bO08547 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.56■□□□□ 0.4
Sec22bO08547 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.56■□□□□ 0.4
Sec22bO08547 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Sec22bO08547 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sec22bO08547 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec22bO08547 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec22bO08547 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec22bO08547 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.55■□□□□ 0.4
Sec22bO08547 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec22bO08547 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec22bO08547 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sec22bO08547 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Sec22bO08547 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Sec22bO08547 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.55■□□□□ 0.4
Sec22bO08547 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sec22bO08547 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.54■□□□□ 0.4
Sec22bO08547 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Sec22bO08547 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sec22bO08547 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sec22bO08547 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.53■□□□□ 0.4
Sec22bO08547 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.53■□□□□ 0.4
Sec22bO08547 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
Sec22bO08547 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Mir5133-201ENSMUST00000174955 77 ntBASIC17.53■□□□□ 0.4
Sec22bO08547 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.53■□□□□ 0.4
Sec22bO08547 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sec22bO08547 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sec22bO08547 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Sec22bO08547 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.52■□□□□ 0.4
Sec22bO08547 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Sec22bO08547 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec22bO08547 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec22bO08547 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec22bO08547 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec22bO08547 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec22bO08547 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.52■□□□□ 0.4
Sec22bO08547 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.52■□□□□ 0.4
Sec22bO08547 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Sec22bO08547 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec22bO08547 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sec22bO08547 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sec22bO08547 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sec22bO08547 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sec22bO08547 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sec22bO08547 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sec22bO08547 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms