Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccdc180J3QNE4 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC32.47■■■□□ 2.79
Ccdc180J3QNE4 AC159205.3-201ENSMUST00000224614 874 ntBASIC32.47■■■□□ 2.79
Ccdc180J3QNE4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
Ccdc180J3QNE4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ccdc180J3QNE4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ccdc180J3QNE4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC32.46■■■□□ 2.79
Ccdc180J3QNE4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Ccdc180J3QNE4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
Ccdc180J3QNE4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC32.46■■■□□ 2.79
Ccdc180J3QNE4 Gm5112-201ENSMUST00000204407 2368 ntBASIC32.46■■■□□ 2.79
Ccdc180J3QNE4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Ccdc180J3QNE4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Ccdc180J3QNE4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Ccdc180J3QNE4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Ccdc180J3QNE4 Gm25016-201ENSMUST00000158399 131 ntBASIC32.44■■■□□ 2.78
Ccdc180J3QNE4 Gm6627-201ENSMUST00000218299 2386 ntBASIC32.44■■■□□ 2.78
Ccdc180J3QNE4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Gm29518-201ENSMUST00000190858 372 ntBASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC32.43■■■□□ 2.78
Ccdc180J3QNE4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc180J3QNE4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc180J3QNE4 Gm18958-201ENSMUST00000174258 762 ntBASIC32.42■■■□□ 2.78
Ccdc180J3QNE4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc180J3QNE4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc180J3QNE4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc180J3QNE4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ccdc180J3QNE4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ccdc180J3QNE4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ccdc180J3QNE4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC32.41■■■□□ 2.78
Ccdc180J3QNE4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC32.41■■■□□ 2.78
Ccdc180J3QNE4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC32.41■■■□□ 2.78
Ccdc180J3QNE4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Ccdc180J3QNE4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ccdc180J3QNE4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Gm21559-201ENSMUST00000220638 855 ntBASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Gm8587-201ENSMUST00000076538 843 ntBASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ccdc180J3QNE4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc180J3QNE4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc180J3QNE4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
Ccdc180J3QNE4 Gm28033-201ENSMUST00000184224 96 ntBASIC32.39■■■□□ 2.78
Ccdc180J3QNE4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc180J3QNE4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc180J3QNE4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Ccdc180J3QNE4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.77
Ccdc180J3QNE4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
Ccdc180J3QNE4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc180J3QNE4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc180J3QNE4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc180J3QNE4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC32.38■■■□□ 2.77
Ccdc180J3QNE4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc180J3QNE4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc180J3QNE4 Mir8112-201ENSMUST00000184382 131 ntBASIC32.37■■■□□ 2.77
Ccdc180J3QNE4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc180J3QNE4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc180J3QNE4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccdc180J3QNE4 Gm17808-201ENSMUST00000200859 894 ntBASIC32.37■■■□□ 2.77
Ccdc180J3QNE4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc180J3QNE4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Gm27389-201ENSMUST00000183622 195 ntBASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Gm8258-201ENSMUST00000055593 1449 ntBASIC32.35■■■□□ 2.77
Ccdc180J3QNE4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms