Protein–RNA interactions for Protein: I3ITR1

AK157302, MCG50313, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AK157302I3ITR1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
AK157302I3ITR1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AK157302I3ITR1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AK157302I3ITR1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AK157302I3ITR1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.81■■□□□ 1.08
AK157302I3ITR1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AK157302I3ITR1 Gm2274-201ENSMUST00000184539 609 ntBASIC21.81■■□□□ 1.08
AK157302I3ITR1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.81■■□□□ 1.08
AK157302I3ITR1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
AK157302I3ITR1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
AK157302I3ITR1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
AK157302I3ITR1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
AK157302I3ITR1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
AK157302I3ITR1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.8■■□□□ 1.08
AK157302I3ITR1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
AK157302I3ITR1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
AK157302I3ITR1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
AK157302I3ITR1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
AK157302I3ITR1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AK157302I3ITR1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AK157302I3ITR1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
AK157302I3ITR1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.78■■□□□ 1.08
AK157302I3ITR1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.78■■□□□ 1.08
AK157302I3ITR1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
AK157302I3ITR1 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.78■■□□□ 1.08
AK157302I3ITR1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
AK157302I3ITR1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
AK157302I3ITR1 Idnk-204ENSMUST00000226010 1898 ntBASIC21.77■■□□□ 1.08
AK157302I3ITR1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AK157302I3ITR1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
AK157302I3ITR1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
AK157302I3ITR1 Mir5130-201ENSMUST00000175160 84 ntBASIC21.77■■□□□ 1.08
AK157302I3ITR1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.77■■□□□ 1.08
AK157302I3ITR1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AK157302I3ITR1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
AK157302I3ITR1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
AK157302I3ITR1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
AK157302I3ITR1 Iqck-206ENSMUST00000208658 2891 ntBASIC21.77■■□□□ 1.07
AK157302I3ITR1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
AK157302I3ITR1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
AK157302I3ITR1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
AK157302I3ITR1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AK157302I3ITR1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
AK157302I3ITR1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
AK157302I3ITR1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AK157302I3ITR1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
AK157302I3ITR1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
AK157302I3ITR1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AK157302I3ITR1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.75■■□□□ 1.07
AK157302I3ITR1 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.75■■□□□ 1.07
AK157302I3ITR1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.75■■□□□ 1.07
AK157302I3ITR1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
AK157302I3ITR1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.74■■□□□ 1.07
AK157302I3ITR1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
AK157302I3ITR1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AK157302I3ITR1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
AK157302I3ITR1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AK157302I3ITR1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.73■■□□□ 1.07
AK157302I3ITR1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AK157302I3ITR1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
AK157302I3ITR1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms