Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nkx1-1G3UXB3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Gm12467-201ENSMUST00000117625 745 ntBASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Nkx1-1G3UXB3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Gm7638-201ENSMUST00000121348 967 ntBASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 AC154616.1-201ENSMUST00000226995 804 ntBASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nkx1-1G3UXB3 Gm43908-201ENSMUST00000205074 1472 ntBASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Gm8312-201ENSMUST00000119380 618 ntBASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 AC102542.1-201ENSMUST00000225204 1138 ntBASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nkx1-1G3UXB3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Gm11779-201ENSMUST00000118541 368 ntBASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Rps4l-201ENSMUST00000071745 943 ntBASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nkx1-1G3UXB3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Gm21147-201ENSMUST00000186046 913 ntBASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Gm45166-201ENSMUST00000209073 683 ntBASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Nkx1-1G3UXB3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Mir5131-201ENSMUST00000175426 93 ntBASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Gm27397-201ENSMUST00000184997 107 ntBASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nkx1-1G3UXB3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkx1-1G3UXB3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Nkx1-1G3UXB3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Gm45657-201ENSMUST00000211318 1349 ntBASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Gm15467-201ENSMUST00000120582 445 ntBASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Gm28925-201ENSMUST00000188586 168 ntBASIC20.14■□□□□ 0.81
Nkx1-1G3UXB3 Gm43066-201ENSMUST00000199589 1260 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms