Protein–RNA interactions for Protein: E9Q5Z9

Gm11239, Predicted gene 11239, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11239E9Q5Z9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11239E9Q5Z9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm11239E9Q5Z9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm11239E9Q5Z9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Gm6345-202ENSMUST00000180900 204 ntBASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm11239E9Q5Z9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Gm7367-201ENSMUST00000057611 492 ntBASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm11239E9Q5Z9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Il3ra-202ENSMUST00000223589 738 ntBASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm11239E9Q5Z9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 Gm37025-201ENSMUST00000195159 829 ntBASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm11239E9Q5Z9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm11239E9Q5Z9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm11239E9Q5Z9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm11239E9Q5Z9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm11239E9Q5Z9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm11239E9Q5Z9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm11239E9Q5Z9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Gm9731-201ENSMUST00000209480 747 ntBASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm11239E9Q5Z9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms