Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Gm7153-201ENSMUST00000117092 455 ntBASIC15.88■□□□□ 0.13
Shank1D3YZU1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Shank1D3YZU1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Shank1D3YZU1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Shank1D3YZU1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Shank1D3YZU1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Shank1D3YZU1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.85■□□□□ 0.13
Shank1D3YZU1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
Shank1D3YZU1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Shank1D3YZU1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shank1D3YZU1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.84■□□□□ 0.13
Shank1D3YZU1 Gm29518-201ENSMUST00000190858 372 ntBASIC15.84■□□□□ 0.13
Shank1D3YZU1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.84■□□□□ 0.13
Shank1D3YZU1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shank1D3YZU1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.84■□□□□ 0.13
Shank1D3YZU1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shank1D3YZU1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Shank1D3YZU1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Shank1D3YZU1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Gm7370-201ENSMUST00000219471 767 ntBASIC15.83■□□□□ 0.13
Shank1D3YZU1 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.83■□□□□ 0.13
Shank1D3YZU1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Shank1D3YZU1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.83■□□□□ 0.12
Shank1D3YZU1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Shank1D3YZU1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms