Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Hmcn1D3YXG0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Mir6956-201ENSMUST00000183598 62 ntBASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Arhgef33-209ENSMUST00000225223 714 ntBASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Gm32996-201ENSMUST00000199828 1447 ntBASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
Hmcn1D3YXG0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Gm5540-201ENSMUST00000131852 1848 ntBASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Gm11355-201ENSMUST00000121120 306 ntBASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Mir3547-201ENSMUST00000175461 88 ntBASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Gm37820-201ENSMUST00000194021 2147 ntBASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
Hmcn1D3YXG0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Gm15173-201ENSMUST00000122049 433 ntBASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Gm27867-201ENSMUST00000184778 125 ntBASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC5.15□□□□□ -1.59
Hmcn1D3YXG0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms