Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hist1h2acC0HKE2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hist1h2acC0HKE2 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hist1h2acC0HKE2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist1h2acC0HKE2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h2acC0HKE2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h2acC0HKE2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hist1h2acC0HKE2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Gm7290-201ENSMUST00000104990 617 ntBASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Gm12918-201ENSMUST00000120234 636 ntBASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Gm15710-201ENSMUST00000121821 636 ntBASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Gm5075-201ENSMUST00000196916 622 ntBASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist1h2acC0HKE2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Gm26571-201ENSMUST00000181399 666 ntBASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist1h2acC0HKE2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.24■□□□□ 0.19
Hist1h2acC0HKE2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Hist1h2acC0HKE2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h2acC0HKE2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h2acC0HKE2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h2acC0HKE2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h2acC0HKE2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist1h2acC0HKE2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.23■□□□□ 0.19
Hist1h2acC0HKE2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms