Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Notumos-201ENSMUST00000151998 2659 ntBASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col4a6B1AVK5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Actl10-202ENSMUST00000226583 1501 ntBASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col4a6B1AVK5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a6B1AVK5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Col4a6B1AVK5 Gm7461-201ENSMUST00000058918 827 ntBASIC18.36■□□□□ 0.53
Col4a6B1AVK5 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col4a6B1AVK5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Col4a6B1AVK5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a6B1AVK5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a6B1AVK5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col4a6B1AVK5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Gm11355-201ENSMUST00000121120 306 ntBASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Gm37722-201ENSMUST00000193757 208 ntBASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col4a6B1AVK5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col4a6B1AVK5 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a6B1AVK5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Col4a6B1AVK5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a6B1AVK5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a6B1AVK5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a6B1AVK5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col4a6B1AVK5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Col4a6B1AVK5 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.33■□□□□ 0.53
Col4a6B1AVK5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Mir770-201ENSMUST00000103252 94 ntBASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col4a6B1AVK5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col4a6B1AVK5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms