Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc112A0AUP1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc112A0AUP1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc112A0AUP1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc112A0AUP1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Ccdc112A0AUP1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc112A0AUP1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Gm7291-201ENSMUST00000199147 382 ntBASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.26■□□□□ 0.83
Ccdc112A0AUP1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc112A0AUP1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc112A0AUP1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Gm38285-201ENSMUST00000192928 922 ntBASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc112A0AUP1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms