Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28729A0A1B0GSW2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm10013-201ENSMUST00000106074 672 ntBASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm7638-201ENSMUST00000121348 967 ntBASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm24841-201ENSMUST00000158676 357 ntBASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28729A0A1B0GSW2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28729A0A1B0GSW2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm6345-202ENSMUST00000180900 204 ntBASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm29791-202ENSMUST00000207888 369 ntBASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Gm7791-201ENSMUST00000219066 539 ntBASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28729A0A1B0GSW2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28729A0A1B0GSW2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28729A0A1B0GSW2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28729A0A1B0GSW2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28729A0A1B0GSW2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28729A0A1B0GSW2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28729A0A1B0GSW2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms