Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv17A0A140T8P8 Fst-202ENSMUST00000223640 2612 ntBASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv17A0A140T8P8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Gm29257-201ENSMUST00000186115 639 ntBASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.6□□□□□ -0.23
Trbv17A0A140T8P8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Rarb-207ENSMUST00000225921 2756 ntBASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trbv17A0A140T8P8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.58□□□□□ -0.23
Trbv17A0A140T8P8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv17A0A140T8P8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.58□□□□□ -0.23
Trbv17A0A140T8P8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trbv17A0A140T8P8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.58□□□□□ -0.23
Trbv17A0A140T8P8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trbv17A0A140T8P8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Rab3c-203ENSMUST00000224180 967 ntBASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trbv17A0A140T8P8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms