Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv23A0A0A6YWQ1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv23A0A0A6YWQ1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv23A0A0A6YWQ1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv23A0A0A6YWQ1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv23A0A0A6YWQ1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv23A0A0A6YWQ1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv23A0A0A6YWQ1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv23A0A0A6YWQ1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv23A0A0A6YWQ1 Reep4-203ENSMUST00000226563 1444 ntBASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm38205-201ENSMUST00000192243 258 ntBASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm5874-201ENSMUST00000096101 508 ntBASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv23A0A0A6YWQ1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Dancr-204ENSMUST00000132389 2347 ntBASIC15.25■□□□□ 0.03
Trbv23A0A0A6YWQ1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms