Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm10849-201ENSMUST00000100397 618 ntBASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm13509-201ENSMUST00000119733 1308 ntBASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 AC140264.2-202ENSMUST00000218746 817 ntBASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ighv3-3A0A0A6YWL2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms