Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav5-1A0A075B5Z7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav5-1A0A075B5Z7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-1A0A075B5Z7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-1A0A075B5Z7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-1A0A075B5Z7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav5-1A0A075B5Z7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Timm23-208ENSMUST00000226683 750 ntBASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-1A0A075B5Z7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Mir5122-201ENSMUST00000175004 89 ntBASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Mir6982-201ENSMUST00000184354 68 ntBASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-1A0A075B5Z7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Odf3b-204ENSMUST00000227834 930 ntBASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-1A0A075B5Z7 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm37055-201ENSMUST00000191866 133 ntBASIC15.23■□□□□ 0.03
Trav5-1A0A075B5Z7 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms