Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Mir7687-201ENSMUST00000184722 59 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Gm28429-201ENSMUST00000188521 363 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Gm25682-201ENSMUST00000083942 164 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
H2afb2S4R1M3 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
H2afb2S4R1M3 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
H2afb2S4R1M3 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
H2afb2S4R1M3 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.58
H2afb2S4R1M3 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm24429-201ENSMUST00000104076 132 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm7657-201ENSMUST00000118851 666 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm14871-201ENSMUST00000119056 194 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm2199-201ENSMUST00000119065 874 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm15388-201ENSMUST00000121578 726 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm11200-201ENSMUST00000121698 448 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm23837-201ENSMUST00000122656 286 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm6542-201ENSMUST00000153606 772 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm24065-201ENSMUST00000157487 264 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm24395-201ENSMUST00000158139 125 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm28186-201ENSMUST00000187447 679 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm28883-201ENSMUST00000189256 369 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm7496-201ENSMUST00000192573 1034 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm43554-201ENSMUST00000199987 186 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm23927-201ENSMUST00000082466 215 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.15□□□□□ -1.59
H2afb2S4R1M3 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm24170-201ENSMUST00000104124 133 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm14711-201ENSMUST00000117056 217 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm15772-201ENSMUST00000118533 438 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm13172-201ENSMUST00000118685 256 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm14485-201ENSMUST00000119489 493 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm23993-201ENSMUST00000157478 144 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm22326-201ENSMUST00000158897 351 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm3008-201ENSMUST00000160566 571 ntBASIC5.14□□□□□ -1.59
H2afb2S4R1M3 Gm20401-201ENSMUST00000173717 212 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms