Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.98□□□□□ -1.61
Cdc40Q9DC48 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm22273-201ENSMUST00000104040 132 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm8595-201ENSMUST00000118250 630 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm24860-201ENSMUST00000158457 276 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm8604-201ENSMUST00000183150 965 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Mir6343-201ENSMUST00000183584 84 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm18800-202ENSMUST00000188688 1105 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Mir6994-201ENSMUST00000198985 73 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm4822-201ENSMUST00000077551 479 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Mir449a-201ENSMUST00000083641 91 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm19131-202ENSMUST00000203464 3208 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Cdc40Q9DC48 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Cdc40Q9DC48 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Cdc40Q9DC48 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Cdc40Q9DC48 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Cdc40Q9DC48 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm14610-201ENSMUST00000118358 966 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm14874-201ENSMUST00000118995 438 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm15754-201ENSMUST00000119191 478 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Mir1963-201ENSMUST00000158594 59 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm20545-201ENSMUST00000174739 210 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Mir5112-201ENSMUST00000174897 60 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm27754-201ENSMUST00000183340 126 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm29201-201ENSMUST00000189120 431 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm44673-201ENSMUST00000205692 996 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm17992-201ENSMUST00000207346 1072 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm6049-201ENSMUST00000222369 458 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 AC160980.2-201ENSMUST00000225131 949 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm43567-201ENSMUST00000197581 1978 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
Cdc40Q9DC48 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.96□□□□□ -1.62
Cdc40Q9DC48 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Cdc40Q9DC48 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms