Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm42955-201ENSMUST00000197355 3393 ntBASIC6.2□□□□□ -1.42
Ddx56Q9D0R4 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm12387-201ENSMUST00000118573 955 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm25782-201ENSMUST00000122526 289 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm24179-201ENSMUST00000158925 127 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm17366-201ENSMUST00000167629 187 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm28934-201ENSMUST00000186491 346 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm8498-201ENSMUST00000188227 974 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm18427-201ENSMUST00000195422 515 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm43779-201ENSMUST00000196691 829 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 AV026068-216ENSMUST00000223874 328 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 AL589696.1-201ENSMUST00000225711 330 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 AC154573.1-201ENSMUST00000225913 4659 ntBASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
Ddx56Q9D0R4 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm10727-201ENSMUST00000197107 1602 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm24434-201ENSMUST00000104081 132 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm15488-201ENSMUST00000121682 670 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm11344-201ENSMUST00000122011 335 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm24733-201ENSMUST00000158863 253 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm16164-201ENSMUST00000160078 468 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm37191-201ENSMUST00000193346 388 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Mir1892-201ENSMUST00000197752 80 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm4859-201ENSMUST00000199625 787 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm44108-201ENSMUST00000203525 422 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm4083-201ENSMUST00000207158 451 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm18205-201ENSMUST00000209215 841 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gm36262-201ENSMUST00000223274 499 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Ddx56Q9D0R4 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ddx56Q9D0R4 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms