Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm23287-201ENSMUST00000179427 116 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm23143-201ENSMUST00000180137 116 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm21614-201ENSMUST00000183260 1005 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Mir6362-201ENSMUST00000184329 107 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm8498-201ENSMUST00000188227 974 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm21715-201ENSMUST00000191056 694 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm37774-201ENSMUST00000194401 245 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm44300-201ENSMUST00000196792 121 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm9245-201ENSMUST00000200528 983 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm4556-201ENSMUST00000217808 355 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 AC164295.1-201ENSMUST00000224861 186 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm24871-201ENSMUST00000083099 116 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Rnu5g-201ENSMUST00000093721 116 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim8Q99PJ2 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm11799-201ENSMUST00000116110 460 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm11617-201ENSMUST00000119609 639 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm13669-201ENSMUST00000122366 457 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm23674-201ENSMUST00000157473 131 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm25557-201ENSMUST00000158084 315 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm23387-201ENSMUST00000158586 107 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm17194-201ENSMUST00000164610 348 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm9890-201ENSMUST00000171867 537 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm27601-201ENSMUST00000184794 127 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm37503-201ENSMUST00000192088 319 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm4332-201ENSMUST00000196114 346 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm36371-201ENSMUST00000209043 1103 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Gm7413-201ENSMUST00000219498 462 ntBASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Trim8Q99PJ2 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms