Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 AC131667.1-201ENSMUST00000214665 2175 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm23311-201ENSMUST00000104152 134 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Mir190b-201ENSMUST00000104803 80 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm10241-201ENSMUST00000117664 286 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm8501-201ENSMUST00000117684 432 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm14580-201ENSMUST00000119122 718 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm9005-201ENSMUST00000119908 607 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm11359-201ENSMUST00000120039 567 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm13998-201ENSMUST00000120952 335 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm8317-201ENSMUST00000121261 471 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm11990-201ENSMUST00000121505 897 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Snora47-201ENSMUST00000157483 138 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm37979-201ENSMUST00000193065 712 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm37177-201ENSMUST00000193768 417 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm43367-201ENSMUST00000199986 625 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm44449-201ENSMUST00000203610 153 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm44058-201ENSMUST00000204335 467 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm18729-201ENSMUST00000217230 621 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm25848-201ENSMUST00000116790 144 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm14751-201ENSMUST00000117693 222 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm6446-201ENSMUST00000120604 818 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm15237-201ENSMUST00000122104 469 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm11341-201ENSMUST00000122316 447 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm9785-202ENSMUST00000144563 593 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Snora81-201ENSMUST00000157310 178 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm20480-201ENSMUST00000173953 250 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm23162-201ENSMUST00000175081 121 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm21654-201ENSMUST00000188086 691 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm28788-201ENSMUST00000189717 375 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm29558-201ENSMUST00000190134 375 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm18698-201ENSMUST00000192327 668 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm44604-201ENSMUST00000205475 496 ntBASIC5.67□□□□□ -1.5
Clrn1Q8K445 Gm44623-201ENSMUST00000207934 434 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms