Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.19□□□□□ -1.58
Ccdc28bQ8CEG5 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm38243-201ENSMUST00000194737 1567 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm14529-201ENSMUST00000117894 406 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm14861-201ENSMUST00000119451 455 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm14375-201ENSMUST00000119490 855 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm5383-201ENSMUST00000121177 617 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm22804-201ENSMUST00000158052 101 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm16297-201ENSMUST00000161466 459 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm2147-201ENSMUST00000193588 639 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm4874-201ENSMUST00000203589 691 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Clec2j-202ENSMUST00000203658 606 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm44074-201ENSMUST00000204562 337 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm44623-201ENSMUST00000207934 434 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Ccdc28bQ8CEG5 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm25917-201ENSMUST00000104267 130 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm13195-201ENSMUST00000117229 261 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm13156-201ENSMUST00000118348 321 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm11533-201ENSMUST00000120287 477 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm15300-201ENSMUST00000122324 279 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm15812-201ENSMUST00000162331 748 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm19029-201ENSMUST00000189923 564 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Gm38011-201ENSMUST00000193312 279 ntBASIC5.17□□□□□ -1.58
Ccdc28bQ8CEG5 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms