Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Atg4aQ8C9S8 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Atg4aQ8C9S8 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.24□□□□□ -1.41
Atg4aQ8C9S8 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Atg4aQ8C9S8 Gm10933-201ENSMUST00000221891 1861 ntBASIC6.24□□□□□ -1.41
Atg4aQ8C9S8 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm37212-201ENSMUST00000192582 3650 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm24789-201ENSMUST00000104282 131 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Mir1188-201ENSMUST00000116756 120 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm8424-201ENSMUST00000117716 988 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm13172-201ENSMUST00000118685 256 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm14125-202ENSMUST00000120921 756 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm15227-201ENSMUST00000121844 399 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Mir7669-201ENSMUST00000183442 58 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm9442-201ENSMUST00000194242 319 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm43037-201ENSMUST00000196808 250 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm7721-201ENSMUST00000200446 546 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm44776-201ENSMUST00000207212 381 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm7768-201ENSMUST00000222988 597 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm7808-201ENSMUST00000082002 387 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Olfr552-201ENSMUST00000098223 954 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 AC153532.2-201ENSMUST00000219753 3844 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.23□□□□□ -1.41
Atg4aQ8C9S8 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 AC131329.1-201ENSMUST00000221204 3487 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm19666-201ENSMUST00000198176 1893 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Defa-ps14-201ENSMUST00000121373 418 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm11804-201ENSMUST00000121663 468 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm14587-201ENSMUST00000121714 658 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm5401-201ENSMUST00000122444 365 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm10319-202ENSMUST00000159439 846 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm27468-201ENSMUST00000183577 106 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Mir6911-201ENSMUST00000184241 69 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm37676-201ENSMUST00000195496 507 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm43968-201ENSMUST00000203388 389 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm45343-201ENSMUST00000210452 828 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 AC157515.1-201ENSMUST00000220953 450 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm4012-201ENSMUST00000221504 581 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 AC165092.2-201ENSMUST00000224681 368 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Gm3962-201ENSMUST00000173027 2587 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 AC112274.1-201ENSMUST00000218957 4274 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.22□□□□□ -1.41
Atg4aQ8C9S8 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms