Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm21572-202ENSMUST00000186850 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28709-201ENSMUST00000186967 456 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21916-202ENSMUST00000187044 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29839-201ENSMUST00000187045 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28442-201ENSMUST00000187052 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21780-202ENSMUST00000187110 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29656-201ENSMUST00000187236 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28194-201ENSMUST00000187412 484 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28886-202ENSMUST00000187889 484 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28554-202ENSMUST00000189175 484 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29213-202ENSMUST00000189703 484 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28851-202ENSMUST00000189757 484 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28461-201ENSMUST00000190023 484 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29454-201ENSMUST00000190805 393 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Mir703-201ENSMUST00000197105 109 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm44673-201ENSMUST00000205692 996 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 AC167192.4-201ENSMUST00000224087 993 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 AC154594.1-201ENSMUST00000225171 1273 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 AC134864.1-201ENSMUST00000226326 511 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 AC154806.4-201ENSMUST00000227406 439 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 AC156574.2-201ENSMUST00000228023 282 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm24035-201ENSMUST00000082867 107 ntBASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sh3rf2Q8BZT2 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm14554-201ENSMUST00000119548 661 ntBASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm14620-201ENSMUST00000120656 383 ntBASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm11677-201ENSMUST00000121349 977 ntBASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm25291-201ENSMUST00000122795 144 ntBASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sh3rf2Q8BZT2 Gm23773-201ENSMUST00000158985 296 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms