Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC154461.5-201ENSMUST00000225429 774 ntBASIC7.68□□□□□ -1.18
Usp40Q8BWR4 AC139294.2-201ENSMUST00000227159 285 ntBASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Usp40Q8BWR4 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm22273-201ENSMUST00000104040 132 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm11270-201ENSMUST00000117685 471 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm16007-201ENSMUST00000117837 286 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm14874-201ENSMUST00000118995 438 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm22261-201ENSMUST00000158691 324 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm20549-201ENSMUST00000174804 429 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm7496-201ENSMUST00000192573 1034 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm44456-201ENSMUST00000196554 89 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm18861-201ENSMUST00000202509 1186 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm19987-201ENSMUST00000216339 499 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 AC154452.1-201ENSMUST00000225819 241 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 n-R5s88-201ENSMUST00000083173 118 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm20789-201ENSMUST00000221002 4195 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm43180-201ENSMUST00000197541 2886 ntBASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Usp40Q8BWR4 Gm11743-201ENSMUST00000117385 1735 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm45632-201ENSMUST00000211532 1888 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm26424-201ENSMUST00000122530 104 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm23883-201ENSMUST00000122686 290 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm6081-201ENSMUST00000134472 489 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm18588-201ENSMUST00000177308 492 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm37543-201ENSMUST00000192443 1031 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm43794-201ENSMUST00000200971 692 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm18645-201ENSMUST00000209593 651 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm19170-201ENSMUST00000212440 1084 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 CT010486.1-201ENSMUST00000224609 422 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm25799-201ENSMUST00000082643 107 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm6818-201ENSMUST00000190556 2558 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Gm14367-201ENSMUST00000119214 1497 ntBASIC7.66□□□□□ -1.18
Usp40Q8BWR4 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms