Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm43516-201ENSMUST00000196891 322 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm43629-201ENSMUST00000201782 704 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm19921-201ENSMUST00000210505 703 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm38574-201ENSMUST00000211855 640 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm4510-201ENSMUST00000218265 427 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm16335-201ENSMUST00000077495 309 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm24265-201ENSMUST00000101833 141 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm23883-201ENSMUST00000122686 290 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm3170-201ENSMUST00000168753 850 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm17152-201ENSMUST00000172430 535 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm18199-201ENSMUST00000173820 835 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm22122-201ENSMUST00000175147 200 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm3348-201ENSMUST00000177813 850 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm24407-201ENSMUST00000177864 141 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm19206-201ENSMUST00000186401 827 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm37203-201ENSMUST00000191618 385 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm38122-201ENSMUST00000192679 885 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm37444-201ENSMUST00000193605 439 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm44690-201ENSMUST00000207984 382 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm19174-201ENSMUST00000216944 956 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 AC163621.2-201ENSMUST00000222229 682 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.62□□□□□ -1.51
Ccdc40Q8BI79 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm26078-201ENSMUST00000104067 128 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm11699-201ENSMUST00000119016 401 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm14369-201ENSMUST00000121355 285 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm23669-201ENSMUST00000157470 128 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm27024-201ENSMUST00000182561 755 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm20239-201ENSMUST00000196610 982 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm43078-201ENSMUST00000197222 168 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Clec2j-202ENSMUST00000203658 606 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm44487-201ENSMUST00000205145 325 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm44091-201ENSMUST00000205212 649 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm17988-201ENSMUST00000208796 535 ntBASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc40Q8BI79 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms