Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.38□□□□□ -1.55
ClpbQ60649 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ClpbQ60649 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ClpbQ60649 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ClpbQ60649 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ClpbQ60649 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm8430-201ENSMUST00000119780 471 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm11446-201ENSMUST00000121319 866 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm25363-201ENSMUST00000158850 245 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Scarna10-201ENSMUST00000158992 325 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm16300-201ENSMUST00000160031 1279 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm18343-201ENSMUST00000172802 604 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm29474-201ENSMUST00000187688 379 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm28396-201ENSMUST00000190309 379 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm31306-201ENSMUST00000197517 508 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm4602-201ENSMUST00000203198 308 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm44954-201ENSMUST00000208513 227 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm45525-201ENSMUST00000210800 389 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Gm8748-201ENSMUST00000211125 587 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm6477-201ENSMUST00000217098 764 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm46192-201ENSMUST00000217894 326 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm26163-201ENSMUST00000083792 178 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.37□□□□□ -1.55
ClpbQ60649 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ClpbQ60649 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
ClpbQ60649 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ClpbQ60649 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ClpbQ60649 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 Gm26078-201ENSMUST00000104067 128 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ClpbQ60649 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
ClpbQ60649 Gm8424-201ENSMUST00000117716 988 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm12313-201ENSMUST00000121347 421 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm26254-201ENSMUST00000122491 118 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm24692-201ENSMUST00000157761 146 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm22160-201ENSMUST00000158405 328 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.36□□□□□ -1.55
ClpbQ60649 Gm17164-201ENSMUST00000169013 506 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm8032-201ENSMUST00000171009 574 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Mir7020-201ENSMUST00000183787 70 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Mir7037-201ENSMUST00000184414 65 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm27409-201ENSMUST00000184727 80 ntBASIC5.36□□□□□ -1.55
ClpbQ60649 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.36□□□□□ -1.55
ClpbQ60649 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms