Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm22372-201ENSMUST00000104589 136 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm14897-201ENSMUST00000118213 207 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm4997-201ENSMUST00000154056 360 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm22534-201ENSMUST00000158173 104 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm25898-201ENSMUST00000158303 106 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm19116-201ENSMUST00000218592 642 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 AC147782.1-201ENSMUST00000219169 475 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 AC113198.1-201ENSMUST00000226353 832 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm21731-201ENSMUST00000079524 489 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm7731-201ENSMUST00000091759 470 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm12919-201ENSMUST00000119855 1594 ntBASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim41Q5NCC3 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Lipe-203ENSMUST00000105177 1251 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm8250-201ENSMUST00000117398 774 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm13641-201ENSMUST00000117993 473 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm14918-201ENSMUST00000118153 268 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm7058-201ENSMUST00000119209 902 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm11484-201ENSMUST00000119808 338 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm15019-201ENSMUST00000120148 434 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm12222-201ENSMUST00000121368 260 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm26256-201ENSMUST00000122499 186 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm22336-201ENSMUST00000157719 107 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm22132-201ENSMUST00000175316 100 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm23047-201ENSMUST00000177661 94 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm25944-201ENSMUST00000178758 94 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Mir6348-201ENSMUST00000183804 120 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm2325-201ENSMUST00000186637 581 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm6137-201ENSMUST00000187552 578 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Trbv8-201ENSMUST00000194020 285 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm43235-201ENSMUST00000200121 297 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm7890-201ENSMUST00000204877 601 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 AC131745.2-201ENSMUST00000225736 565 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm20775-201ENSMUST00000100115 1851 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm6101-201ENSMUST00000195384 1867 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gm42639-201ENSMUST00000197061 1871 ntBASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim41Q5NCC3 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC11.65□□□□□ -0.55
Trim41Q5NCC3 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim41Q5NCC3 Gm37525-201ENSMUST00000193499 2871 ntBASIC11.65□□□□□ -0.55
Trim41Q5NCC3 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm37548-201ENSMUST00000194519 3814 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm12768-201ENSMUST00000120055 759 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm14506-201ENSMUST00000121165 536 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm7855-201ENSMUST00000137737 687 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm6155-201ENSMUST00000173735 341 ntBASIC11.64□□□□□ -0.55
Trim41Q5NCC3 Gm23619-201ENSMUST00000178411 94 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms