Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm8035-201ENSMUST00000204625 687 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm6702-201ENSMUST00000208496 471 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Usp39Q3TIX9 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.71□□□□□ -1.49
Usp39Q3TIX9 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Usp39Q3TIX9 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm12636-201ENSMUST00000117395 624 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm12988-201ENSMUST00000119054 478 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm16053-201ENSMUST00000120511 188 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm13593-201ENSMUST00000121329 692 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm11797-201ENSMUST00000121336 754 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm23030-201ENSMUST00000158004 273 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Mir7008-201ENSMUST00000184398 63 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Mir7037-201ENSMUST00000184414 65 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm27219-201ENSMUST00000184633 742 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm28803-201ENSMUST00000190385 764 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm19224-201ENSMUST00000190477 793 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm7299-201ENSMUST00000194441 581 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm43392-201ENSMUST00000196560 434 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm31861-201ENSMUST00000204563 672 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm44118-201ENSMUST00000204665 229 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm44665-201ENSMUST00000205381 251 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm44961-201ENSMUST00000207450 196 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm33178-201ENSMUST00000212090 257 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 AC166358.6-201ENSMUST00000221834 1206 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Mir298-201ENSMUST00000083476 82 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp39Q3TIX9 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Usp39Q3TIX9 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms