Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm11913-201ENSMUST00000119094 336 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm14887-201ENSMUST00000119522 663 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm14601-201ENSMUST00000120892 236 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm8761-201ENSMUST00000121507 955 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm7931-201ENSMUST00000121537 271 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm5809-201ENSMUST00000121854 529 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm7973-201ENSMUST00000122107 488 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm26402-201ENSMUST00000158499 113 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm23025-201ENSMUST00000158769 111 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm24957-201ENSMUST00000179604 132 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm27539-201ENSMUST00000184971 224 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm18728-201ENSMUST00000186155 753 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm28628-201ENSMUST00000187006 264 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm29159-201ENSMUST00000187969 379 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm42581-201ENSMUST00000201774 966 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm44111-201ENSMUST00000204649 399 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm18940-201ENSMUST00000222518 871 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm7739-201ENSMUST00000221131 1560 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm44121-201ENSMUST00000205169 2006 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Col8a1Q00780 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC5.45□□□□□ -1.54
Col8a1Q00780 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col8a1Q00780 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 AC107742.1-201ENSMUST00000227769 1390 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm36527-201ENSMUST00000195500 3029 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm15971-201ENSMUST00000119372 211 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm7309-201ENSMUST00000121670 581 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm15157-201ENSMUST00000121852 702 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Mir1907-201ENSMUST00000122509 90 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm22755-201ENSMUST00000157143 100 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm23891-201ENSMUST00000158114 138 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm27158-201ENSMUST00000183813 238 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm29460-201ENSMUST00000188607 714 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm43505-201ENSMUST00000200579 139 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm44989-201ENSMUST00000204749 217 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col8a1Q00780 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms