Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC7.94□□□□□ -1.14
Cux1P53564 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
Cux1P53564 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cux1P53564 Gm43887-201ENSMUST00000204727 3186 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Cux1P53564 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC7.94□□□□□ -1.14
Cux1P53564 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Cux1P53564 AC107645.1-201ENSMUST00000228660 1810 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Gm44723-201ENSMUST00000207369 4000 ntBASIC7.94□□□□□ -1.14
Cux1P53564 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC7.94□□□□□ -1.14
Cux1P53564 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC7.94□□□□□ -1.14
Cux1P53564 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC7.94□□□□□ -1.14
Cux1P53564 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC7.93□□□□□ -1.14
Cux1P53564 Gm12190-201ENSMUST00000120001 187 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC7.93□□□□□ -1.14
Cux1P53564 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Cux1P53564 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Gm27688-201ENSMUST00000183634 91 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Gm28503-201ENSMUST00000185966 147 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Gm20954-201ENSMUST00000189078 644 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Gm5288-201ENSMUST00000198323 1119 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Gm37435-201ENSMUST00000192078 3947 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Cux1P53564 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Gm1966-201ENSMUST00000184540 7293 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
Cux1P53564 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Cux1P53564 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Cux1P53564 Gm4852-201ENSMUST00000121202 729 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC7.93□□□□□ -1.14
Cux1P53564 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Cux1P53564 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC7.93□□□□□ -1.14
Cux1P53564 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Gm32308-201ENSMUST00000203053 280 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC7.93□□□□□ -1.14
Cux1P53564 AC121599.1-201ENSMUST00000224276 449 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Cux1P53564 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Cux1P53564 Gm43784-201ENSMUST00000202922 2436 ntBASIC7.93□□□□□ -1.14
Cux1P53564 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Cux1P53564 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Cux1P53564 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Cux1P53564 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC7.92□□□□□ -1.14
Cux1P53564 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Cux1P53564 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Cux1P53564 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Cux1P53564 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC7.92□□□□□ -1.14
Cux1P53564 Gm12281-201ENSMUST00000119536 298 ntBASIC7.92□□□□□ -1.14
Cux1P53564 Gm25665-201ENSMUST00000157695 110 ntBASIC7.92□□□□□ -1.14
Cux1P53564 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Cux1P53564 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC7.92□□□□□ -1.14
Cux1P53564 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Cux1P53564 Gm44603-201ENSMUST00000206820 367 ntBASIC7.92□□□□□ -1.14
Cux1P53564 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Cux1P53564 Gm7045-201ENSMUST00000221466 605 ntBASIC7.92□□□□□ -1.14
Cux1P53564 AC154527.3-201ENSMUST00000225519 989 ntBASIC7.92□□□□□ -1.14
Cux1P53564 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Cux1P53564 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC7.92□□□□□ -1.14
Cux1P53564 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Cux1P53564 Gm19084-201ENSMUST00000222939 1762 ntBASIC7.92□□□□□ -1.14
Cux1P53564 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Cux1P53564 AC139218.1-201ENSMUST00000228215 4287 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Gm37137-201ENSMUST00000195138 2684 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Gm42860-201ENSMUST00000196492 3991 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Gm37509-201ENSMUST00000194867 3169 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Cux1P53564 Gm37779-201ENSMUST00000194221 3380 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Cux1P53564 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Cux1P53564 Gm42781-201ENSMUST00000201317 2719 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Cux1P53564 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Cux1P53564 Gm23193-201ENSMUST00000102427 82 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Gm12520-201ENSMUST00000117493 316 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
Cux1P53564 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC7.91□□□□□ -1.14
Cux1P53564 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Gm38011-201ENSMUST00000193312 279 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC7.91□□□□□ -1.14
Cux1P53564 Gm43309-201ENSMUST00000200837 458 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Gm44138-201ENSMUST00000204939 271 ntBASIC7.91□□□□□ -1.14
Cux1P53564 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC7.91□□□□□ -1.14
Cux1P53564 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Cux1P53564 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Cux1P53564 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Cux1P53564 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Cux1P53564 AC124569.3-201ENSMUST00000224860 1621 ntBASIC7.9□□□□□ -1.14
Cux1P53564 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Cux1P53564 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Cux1P53564 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Cux1P53564 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Cux1P53564 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms