Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 AC124426.1-203ENSMUST00000221814 1362 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Shmt1P50431 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 AC130827.1-201ENSMUST00000220476 3850 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm11212-201ENSMUST00000118337 618 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm13473-201ENSMUST00000119289 367 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm11891-201ENSMUST00000121241 619 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Zfp950-206ENSMUST00000178819 171 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm27315-201ENSMUST00000183977 154 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm28883-201ENSMUST00000189256 369 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm29736-201ENSMUST00000198189 385 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm8891-201ENSMUST00000198546 832 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm43456-201ENSMUST00000202519 457 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm43922-201ENSMUST00000205071 328 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 AC124542.1-201ENSMUST00000205588 908 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm45082-201ENSMUST00000206082 601 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm45008-201ENSMUST00000206420 493 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm17850-201ENSMUST00000210023 1154 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 AC161426.1-201ENSMUST00000214137 286 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 AC156795.1-201ENSMUST00000214655 414 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC6.09□□□□□ -1.43
Shmt1P50431 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.09□□□□□ -1.43
Shmt1P50431 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.09□□□□□ -1.43
Shmt1P50431 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC6.09□□□□□ -1.43
Shmt1P50431 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm7887-201ENSMUST00000056948 537 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Shmt1P50431 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Shmt1P50431 Mir331-201ENSMUST00000083673 96 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Shmt1P50431 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.09□□□□□ -1.43
Shmt1P50431 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Shmt1P50431 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
Shmt1P50431 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.44
Shmt1P50431 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Shmt1P50431 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Shmt1P50431 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Shmt1P50431 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.44
Shmt1P50431 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Shmt1P50431 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Shmt1P50431 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Shmt1P50431 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Shmt1P50431 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm22499-201ENSMUST00000104501 135 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Shmt1P50431 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm11737-201ENSMUST00000118713 468 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm16053-201ENSMUST00000120511 188 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm13430-201ENSMUST00000121366 288 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm8061-201ENSMUST00000122380 350 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm26372-201ENSMUST00000157831 236 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Shmt1P50431 Gm24103-201ENSMUST00000174930 77 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Gm22650-201ENSMUST00000175138 105 ntBASIC6.08□□□□□ -1.44
Shmt1P50431 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms