Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm23943-201ENSMUST00000179712 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm25228-201ENSMUST00000180121 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm23304-201ENSMUST00000180209 121 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm26731-201ENSMUST00000180683 543 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm28683-201ENSMUST00000187134 615 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm28840-205ENSMUST00000189320 615 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm18969-201ENSMUST00000189423 730 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm28835-203ENSMUST00000190062 615 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm18864-201ENSMUST00000194518 1051 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm42753-201ENSMUST00000196718 1268 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm8874-201ENSMUST00000196826 286 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm42542-201ENSMUST00000197978 268 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 AC140409.4-201ENSMUST00000215757 538 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 AC166358.3-201ENSMUST00000221456 181 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 AC125543.4-201ENSMUST00000223385 117 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Gm37180-201ENSMUST00000195335 2819 ntBASIC4.88□□□□□ -1.63
Tnfsf4P43488 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Tnfsf4P43488 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm37429-201ENSMUST00000193807 1799 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm14335-201ENSMUST00000119165 810 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm15803-201ENSMUST00000120118 394 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm24371-201ENSMUST00000122662 267 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm25290-201ENSMUST00000122796 144 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Klra13-ps-201ENSMUST00000125813 802 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm24295-201ENSMUST00000158298 131 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm38131-201ENSMUST00000192449 430 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm38097-201ENSMUST00000192936 439 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm37882-201ENSMUST00000195254 196 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm9480-201ENSMUST00000198038 616 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm17984-201ENSMUST00000205286 859 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm38574-201ENSMUST00000211855 640 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Mir449a-201ENSMUST00000083641 91 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm44248-201ENSMUST00000203079 1549 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Tnfsf4P43488 Gm33378-201ENSMUST00000219831 2758 ntBASIC4.87□□□□□ -1.63
Tnfsf4P43488 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm24789-201ENSMUST00000104282 131 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm13321-201ENSMUST00000117101 400 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm13245-201ENSMUST00000119646 260 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm16463-201ENSMUST00000120527 721 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm23121-201ENSMUST00000157653 173 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm4134-201ENSMUST00000173244 563 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Tnfsf4P43488 Mir7082-201ENSMUST00000183526 92 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Mir7220-201ENSMUST00000183978 60 ntBASIC4.86□□□□□ -1.63
Tnfsf4P43488 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms