Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HttP42859 Gm42535-201ENSMUST00000197312 1399 ntBASIC5.27□□□□□ -1.57
HttP42859 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
HttP42859 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Gm26367-201ENSMUST00000104165 132 ntBASIC5.27□□□□□ -1.57
HttP42859 Gm24251-201ENSMUST00000157324 114 ntBASIC5.27□□□□□ -1.57
HttP42859 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.27□□□□□ -1.57
HttP42859 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.27□□□□□ -1.57
HttP42859 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HttP42859 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HttP42859 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HttP42859 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
HttP42859 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC5.26□□□□□ -1.57
HttP42859 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Gm11488-201ENSMUST00000117277 863 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm15012-201ENSMUST00000119176 106 ntBASIC5.26□□□□□ -1.57
HttP42859 Mir5134-201ENSMUST00000175529 78 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm37444-201ENSMUST00000193605 439 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm5338-201ENSMUST00000209530 639 ntBASIC5.26□□□□□ -1.57
HttP42859 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.26□□□□□ -1.57
HttP42859 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HttP42859 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HttP42859 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HttP42859 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HttP42859 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HttP42859 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Gm45876-201ENSMUST00000212698 2709 ntBASIC5.26□□□□□ -1.57
HttP42859 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm3788-201ENSMUST00000119949 136 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm5383-201ENSMUST00000121177 617 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm6632-201ENSMUST00000168425 954 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm13249-201ENSMUST00000177803 345 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm13144-201ENSMUST00000179385 345 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm10048-201ENSMUST00000194196 372 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm45857-201ENSMUST00000212207 356 ntBASIC5.26□□□□□ -1.57
HttP42859 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.26□□□□□ -1.57
HttP42859 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.26□□□□□ -1.57
HttP42859 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HttP42859 Gm42615-201ENSMUST00000197704 1820 ntBASIC5.26□□□□□ -1.57
HttP42859 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
HttP42859 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HttP42859 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HttP42859 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.26□□□□□ -1.57
HttP42859 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HttP42859 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.26□□□□□ -1.57
HttP42859 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HttP42859 Gm13503-201ENSMUST00000119017 446 ntBASIC5.26□□□□□ -1.57
HttP42859 Mup-ps17-201ENSMUST00000120723 218 ntBASIC5.26□□□□□ -1.57
HttP42859 Mir1907-201ENSMUST00000122509 90 ntBASIC5.26□□□□□ -1.57
HttP42859 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.26□□□□□ -1.57
HttP42859 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5.26□□□□□ -1.57
HttP42859 Gm18599-201ENSMUST00000206729 1125 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm45434-201ENSMUST00000210550 293 ntBASIC5.26□□□□□ -1.57
HttP42859 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HttP42859 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Srgap1-202ENSMUST00000081688 7787 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.25□□□□□ -1.57
HttP42859 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Gm38026-201ENSMUST00000193284 3880 ntBASIC5.25□□□□□ -1.57
HttP42859 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HttP42859 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
HttP42859 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Gm24987-201ENSMUST00000104453 134 ntBASIC5.25□□□□□ -1.57
HttP42859 Gm12332-201ENSMUST00000121397 922 ntBASIC5.25□□□□□ -1.57
HttP42859 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HttP42859 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HttP42859 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC5.25□□□□□ -1.57
HttP42859 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HttP42859 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms