Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22529-201ENSMUST00000158817 123 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Scarna10-201ENSMUST00000158992 325 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm7335-201ENSMUST00000172475 373 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm10784-201ENSMUST00000178715 238 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Traf1P39428 Gm19791-201ENSMUST00000180398 859 ntBASIC6.3□□□□□ -1.4
Traf1P39428 6330403N20Rik-201ENSMUST00000180467 1189 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Traf1P39428 Gm37336-202ENSMUST00000193705 468 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm17984-201ENSMUST00000205286 859 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Glud-ps-201ENSMUST00000206310 657 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm18468-201ENSMUST00000207321 369 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm18470-201ENSMUST00000207467 420 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm18465-201ENSMUST00000207468 369 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm18464-201ENSMUST00000207803 420 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm18458-201ENSMUST00000207908 369 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm18461-201ENSMUST00000208421 420 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.3□□□□□ -1.4
Traf1P39428 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gm18247-201ENSMUST00000222937 601 ntBASIC6.3□□□□□ -1.4
Traf1P39428 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.3□□□□□ -1.4
Traf1P39428 AC154562.1-201ENSMUST00000226140 966 ntBASIC6.3□□□□□ -1.4
Traf1P39428 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Traf1P39428 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Traf1P39428 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Traf1P39428 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Traf1P39428 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.3□□□□□ -1.4
Traf1P39428 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Traf1P39428 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Traf1P39428 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Traf1P39428 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Traf1P39428 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.29□□□□□ -1.4
Traf1P39428 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC6.29□□□□□ -1.4
Traf1P39428 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Traf1P39428 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm11975-201ENSMUST00000118772 481 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Gm23116-201ENSMUST00000158481 67 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm25048-201ENSMUST00000158598 91 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.29□□□□□ -1.4
Traf1P39428 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Traf1P39428 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.29□□□□□ -1.4
Traf1P39428 Gm8321-201ENSMUST00000181691 980 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Mir6903-201ENSMUST00000183597 88 ntBASIC6.29□□□□□ -1.4
Traf1P39428 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Gm18553-201ENSMUST00000194152 634 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm44456-201ENSMUST00000196554 89 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.29□□□□□ -1.4
Traf1P39428 Gm44048-201ENSMUST00000204531 361 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm19186-201ENSMUST00000219922 333 ntBASIC6.29□□□□□ -1.4
Traf1P39428 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.29□□□□□ -1.4
Traf1P39428 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Traf1P39428 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm23459-201ENSMUST00000083259 131 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Traf1P39428 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.29□□□□□ -1.4
Traf1P39428 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Traf1P39428 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Traf1P39428 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.29□□□□□ -1.4
Traf1P39428 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.28□□□□□ -1.4
Traf1P39428 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Traf1P39428 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Traf1P39428 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Traf1P39428 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Traf1P39428 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Traf1P39428 Gm22194-201ENSMUST00000116869 95 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms