Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.45□□□□□ -1.54
Lire1P11260 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.45□□□□□ -1.54
Lire1P11260 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Lire1P11260 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Lire1P11260 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Lire1P11260 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
Lire1P11260 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
Lire1P11260 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Lire1P11260 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Lire1P11260 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Gm15073-201ENSMUST00000117432 634 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm13333-201ENSMUST00000119424 781 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm7670-201ENSMUST00000121272 641 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Gm16269-201ENSMUST00000160532 409 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Lire1P11260 Gm9597-201ENSMUST00000171913 602 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm25037-201ENSMUST00000175418 110 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Trbv27-201ENSMUST00000193711 277 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.44□□□□□ -1.54
Lire1P11260 Gm36985-201ENSMUST00000195595 379 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm42666-201ENSMUST00000201954 152 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm8039-201ENSMUST00000204758 712 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm18193-201ENSMUST00000210017 772 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm46223-201ENSMUST00000215196 675 ntBASIC5.44□□□□□ -1.54
Lire1P11260 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.44□□□□□ -1.54
Lire1P11260 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC5.44□□□□□ -1.54
Lire1P11260 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Lire1P11260 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 BC023105-201ENSMUST00000073997 1227 ntBASIC5.44□□□□□ -1.54
Lire1P11260 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Lire1P11260 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Lire1P11260 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Lire1P11260 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Lire1P11260 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Lire1P11260 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.44□□□□□ -1.54
Lire1P11260 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lire1P11260 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.43□□□□□ -1.54
Lire1P11260 Gm24265-201ENSMUST00000101833 141 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm26300-201ENSMUST00000102282 94 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm22372-201ENSMUST00000104589 136 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm13013-201ENSMUST00000119087 523 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm15331-201ENSMUST00000120225 385 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm13009-201ENSMUST00000121307 267 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm11965-201ENSMUST00000122017 277 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.43□□□□□ -1.54
Lire1P11260 Gm24065-201ENSMUST00000157487 264 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm22724-201ENSMUST00000158091 127 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm25445-201ENSMUST00000158996 299 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm2389-201ENSMUST00000160487 189 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm3008-201ENSMUST00000160566 571 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm27036-201ENSMUST00000182465 980 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.43□□□□□ -1.54
Lire1P11260 Gm21742-201ENSMUST00000189352 548 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm43744-201ENSMUST00000196387 688 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm43315-201ENSMUST00000198120 313 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm18330-201ENSMUST00000199246 547 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm4742-201ENSMUST00000200261 771 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.43□□□□□ -1.54
Lire1P11260 Gm18290-201ENSMUST00000202900 844 ntBASIC5.43□□□□□ -1.54
Lire1P11260 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Lire1P11260 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC5.43□□□□□ -1.54
Lire1P11260 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.43□□□□□ -1.54
Lire1P11260 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Lire1P11260 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms