Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Mir6516-201ENSMUST00000196236 110 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm44281-201ENSMUST00000203090 166 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm45215-201ENSMUST00000206407 395 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm36501-201ENSMUST00000221857 745 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm6474-201ENSMUST00000223250 699 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.7□□□□□ -1.5
Chmp6P0C0A3 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp6P0C0A3 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm13890-201ENSMUST00000117578 390 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm14601-201ENSMUST00000120892 236 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm22106-201ENSMUST00000122544 127 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm22852-201ENSMUST00000177899 101 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm22420-201ENSMUST00000178795 126 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm23459-201ENSMUST00000083259 131 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.69□□□□□ -1.5
Chmp6P0C0A3 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp6P0C0A3 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm7670-201ENSMUST00000121272 641 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm22895-201ENSMUST00000157508 308 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm7609-204ENSMUST00000161424 461 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm17907-201ENSMUST00000173150 710 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm28017-201ENSMUST00000183434 126 ntBASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.68□□□□□ -1.5
Chmp6P0C0A3 Gm33952-201ENSMUST00000197795 408 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms