Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm24949-201ENSMUST00000183609 215 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm29376-201ENSMUST00000189357 835 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm18698-201ENSMUST00000192327 668 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm2979-201ENSMUST00000193442 463 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm44277-201ENSMUST00000205128 649 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm44518-201ENSMUST00000208080 4370 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm44571-201ENSMUST00000208092 533 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm8288-201ENSMUST00000223406 593 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 AC154806.3-201ENSMUST00000227376 439 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Atp6v1g3-201ENSMUST00000027643 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Lima1Q9ERG0 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm23593-201ENSMUST00000104309 120 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Mir879-201ENSMUST00000104703 76 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm11971-201ENSMUST00000117715 288 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm13367-201ENSMUST00000119955 796 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm15022-201ENSMUST00000122074 746 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm23539-201ENSMUST00000157537 224 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm25363-201ENSMUST00000158850 245 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm37187-201ENSMUST00000193425 341 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm44132-201ENSMUST00000205142 151 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Gm2961-201ENSMUST00000211074 772 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 AC134439.1-201ENSMUST00000220923 600 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Lima1Q9ERG0 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
Lima1Q9ERG0 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Lima1Q9ERG0 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Lima1Q9ERG0 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Lima1Q9ERG0 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm7205-201ENSMUST00000196032 1323 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm14560-201ENSMUST00000118672 375 ntBASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.08□□□□□ -1.6
Lima1Q9ERG0 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms