Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm19231-201ENSMUST00000193212 830 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm37710-201ENSMUST00000193501 1274 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm36997-201ENSMUST00000195090 707 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm42652-201ENSMUST00000199073 614 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm38670-201ENSMUST00000199248 77 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm43054-201ENSMUST00000199495 884 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm6520-201ENSMUST00000200636 410 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm44132-201ENSMUST00000205142 151 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm45722-201ENSMUST00000213075 466 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.67□□□□□ -1.5
Vps28Q9D1C8 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Tet1-201ENSMUST00000050826 13986 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Mir546-201ENSMUST00000102105 121 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm11774-201ENSMUST00000118601 293 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm6884-201ENSMUST00000119318 615 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm9435-201ENSMUST00000120379 877 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm14695-201ENSMUST00000121721 282 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm14840-201ENSMUST00000122135 594 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Mir1970-201ENSMUST00000157839 104 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Mir7037-201ENSMUST00000184414 65 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm28883-201ENSMUST00000189256 369 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm37681-201ENSMUST00000193880 727 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm35648-201ENSMUST00000202304 475 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm44134-202ENSMUST00000204777 545 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm44580-201ENSMUST00000206333 877 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 CU024910.1-201ENSMUST00000214310 418 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm10064-201ENSMUST00000071235 399 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm22807-201ENSMUST00000082737 129 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.66□□□□□ -1.5
Vps28Q9D1C8 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms