Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm22273-201ENSMUST00000104040 132 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm12850-201ENSMUST00000119210 436 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm13488-201ENSMUST00000120419 179 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm12808-201ENSMUST00000120597 404 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm7309-201ENSMUST00000121670 581 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm13738-201ENSMUST00000122437 469 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm25603-201ENSMUST00000158361 105 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm23774-201ENSMUST00000158990 131 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm21241-201ENSMUST00000179551 934 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm20819-201ENSMUST00000191091 925 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm20871-201ENSMUST00000191322 931 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Mir6994-201ENSMUST00000198985 73 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm43973-201ENSMUST00000203562 210 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm37018-201ENSMUST00000192441 3869 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm20342-201ENSMUST00000185480 9720 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.04□□□□□ -1.44
Smc1aQ9CU62 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm6134-201ENSMUST00000117265 171 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm11270-201ENSMUST00000117685 471 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm14871-201ENSMUST00000119056 194 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm14601-201ENSMUST00000120892 236 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm15838-201ENSMUST00000161575 180 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm10087-201ENSMUST00000167650 330 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm5066-201ENSMUST00000188479 822 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm37070-201ENSMUST00000193272 460 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm17952-201ENSMUST00000193914 747 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm2961-201ENSMUST00000211074 772 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Phyhipl-206ENSMUST00000162251 1540 ntTSL 3 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Smc1aQ9CU62 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
Smc1aQ9CU62 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Smc1aQ9CU62 Gm37834-201ENSMUST00000194517 3035 ntBASIC6.02□□□□□ -1.45
Smc1aQ9CU62 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Smc1aQ9CU62 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms