Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm9894-201ENSMUST00000171257 2904 ntBASIC5.7□□□□□ -1.5
Clrn1Q8K445 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Clrn1Q8K445 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Clrn1Q8K445 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Clrn1Q8K445 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.7□□□□□ -1.5
Clrn1Q8K445 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm14515-201ENSMUST00000121327 216 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm11879-201ENSMUST00000121885 702 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm14413-201ENSMUST00000122158 408 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm15300-201ENSMUST00000122324 279 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm25525-201ENSMUST00000177701 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm26178-201ENSMUST00000177706 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm26465-201ENSMUST00000178517 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm24317-201ENSMUST00000178536 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm25021-201ENSMUST00000179184 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm22995-201ENSMUST00000179670 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm24424-201ENSMUST00000179714 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm24389-201ENSMUST00000179962 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm25672-201ENSMUST00000180111 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Mir6921-201ENSMUST00000183719 80 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm29163-201ENSMUST00000188029 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm19224-201ENSMUST00000190477 793 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm28211-201ENSMUST00000190920 315 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm7832-201ENSMUST00000202613 880 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm43897-201ENSMUST00000204019 309 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm5338-201ENSMUST00000209530 639 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm6009-201ENSMUST00000210848 280 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm8106-201ENSMUST00000213123 523 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm5374-201ENSMUST00000222868 657 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gnrh1-202ENSMUST00000223929 428 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm7204-201ENSMUST00000062591 600 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm23815-201ENSMUST00000083231 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm23520-201ENSMUST00000093736 107 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 AC125328.1-201ENSMUST00000226812 2265 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Clrn1Q8K445 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Clrn1Q8K445 AC122357.1-201ENSMUST00000221652 1515 ntBASIC5.69□□□□□ -1.5
Clrn1Q8K445 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.68□□□□□ -1.5
Clrn1Q8K445 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Clrn1Q8K445 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms