Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm11825-201ENSMUST00000120710 736 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm26350-201ENSMUST00000157531 288 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm26489-201ENSMUST00000157880 264 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm24940-201ENSMUST00000158326 108 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm17907-201ENSMUST00000173150 710 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm23633-201ENSMUST00000175293 119 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm27854-201ENSMUST00000175578 244 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm37445-201ENSMUST00000195318 242 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm38670-201ENSMUST00000199248 77 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm43054-201ENSMUST00000199495 884 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm44277-201ENSMUST00000205128 649 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Prpf39Q8K2Z2 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm15428-201ENSMUST00000121352 333 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm6542-201ENSMUST00000153606 772 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm23441-201ENSMUST00000157268 127 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm24395-201ENSMUST00000158139 125 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28943-201ENSMUST00000186187 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28736-201ENSMUST00000186257 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29401-201ENSMUST00000186690 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29178-204ENSMUST00000186784 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28589-201ENSMUST00000186991 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28936-201ENSMUST00000187153 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29121-201ENSMUST00000187611 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28243-201ENSMUST00000187801 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28844-202ENSMUST00000187977 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm8581-201ENSMUST00000188636 890 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29058-201ENSMUST00000189510 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm29624-201ENSMUST00000190018 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28780-201ENSMUST00000190223 615 ntBASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC5.55□□□□□ -1.52
Prpf39Q8K2Z2 Gm28969-211ENSMUST00000190992 615 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms