Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 AC160120.1-201ENSMUST00000227446 663 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Gm23459-201ENSMUST00000083259 131 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC6.27□□□□□ -1.41
Nup88Q8CEC0 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm14985-201ENSMUST00000118693 786 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm11825-201ENSMUST00000120710 736 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm12731-201ENSMUST00000120932 268 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm11677-201ENSMUST00000121349 977 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm25861-201ENSMUST00000158251 109 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm21241-201ENSMUST00000179551 934 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm20819-201ENSMUST00000191091 925 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm17981-201ENSMUST00000191109 739 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm20871-201ENSMUST00000191322 931 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm44048-201ENSMUST00000204531 361 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm44539-201ENSMUST00000206010 238 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm6362-201ENSMUST00000217686 836 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm18904-201ENSMUST00000218756 329 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 AC154562.1-201ENSMUST00000226140 966 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Nup88Q8CEC0 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm37181-201ENSMUST00000192513 1727 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm12401-201ENSMUST00000118435 228 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm14874-201ENSMUST00000118995 438 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm15754-201ENSMUST00000119191 478 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm11484-201ENSMUST00000119808 338 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm12413-201ENSMUST00000121508 312 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm13007-201ENSMUST00000121866 365 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm15171-201ENSMUST00000122191 334 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm15838-201ENSMUST00000161575 180 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm21842-202ENSMUST00000185311 174 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm29285-201ENSMUST00000185500 174 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm21801-202ENSMUST00000185537 174 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm28312-201ENSMUST00000185976 174 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup88Q8CEC0 Gm29213-201ENSMUST00000186199 174 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms