Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25865-201ENSMUST00000158247 104 ntBASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Gm6673-201ENSMUST00000166114 700 ntBASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Gm43554-201ENSMUST00000199987 186 ntBASIC5.32□□□□□ -1.56
Trub1Q8C0D0 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Trub1Q8C0D0 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm14711-201ENSMUST00000117056 217 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm13172-201ENSMUST00000118685 256 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm14925-201ENSMUST00000120611 438 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm11805-201ENSMUST00000121238 600 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm22106-201ENSMUST00000122544 127 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm22214-201ENSMUST00000157563 172 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Mir6921-201ENSMUST00000183719 80 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm27818-201ENSMUST00000184536 159 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm5734-201ENSMUST00000189787 913 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm42652-201ENSMUST00000199073 614 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm2926-201ENSMUST00000205625 239 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 AC154576.2-203ENSMUST00000224736 253 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm9386-201ENSMUST00000095195 381 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm36963-201ENSMUST00000193506 2324 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Trub1Q8C0D0 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm44248-201ENSMUST00000203079 1549 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm24789-201ENSMUST00000104282 131 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm14563-201ENSMUST00000120571 354 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm26925-201ENSMUST00000182470 957 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm29813-201ENSMUST00000195856 447 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm18215-201ENSMUST00000204429 798 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm18468-201ENSMUST00000207321 369 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm18470-201ENSMUST00000207467 420 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm18465-201ENSMUST00000207468 369 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm18464-201ENSMUST00000207803 420 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm18458-201ENSMUST00000207908 369 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Gm18461-201ENSMUST00000208421 420 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Trub1Q8C0D0 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.3□□□□□ -1.56
Trub1Q8C0D0 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 129.2 ms