Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm19060-201ENSMUST00000201959 421 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm9472-201ENSMUST00000221625 526 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Ccdc40Q8BI79 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Gm8872-201ENSMUST00000197475 1341 ntBASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.65□□□□□ -1.51
Ccdc40Q8BI79 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm24886-201ENSMUST00000104384 123 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm4989-201ENSMUST00000118711 749 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm11826-201ENSMUST00000118781 438 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm3931-201ENSMUST00000119038 455 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm14472-201ENSMUST00000119815 282 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm13532-201ENSMUST00000120373 240 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm15044-201ENSMUST00000120703 598 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm15959-201ENSMUST00000121724 368 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm22857-201ENSMUST00000174969 134 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm27266-201ENSMUST00000184521 123 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm18482-201ENSMUST00000202405 760 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm43501-201ENSMUST00000202513 107 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm45185-201ENSMUST00000207556 404 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm33178-201ENSMUST00000212090 257 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ccdc40Q8BI79 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Mir292-201ENSMUST00000104847 82 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm8424-201ENSMUST00000117716 988 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm9085-201ENSMUST00000119994 1072 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm23224-201ENSMUST00000158122 271 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm25445-201ENSMUST00000158996 299 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm23806-201ENSMUST00000175157 109 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm38181-201ENSMUST00000181357 720 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm37241-201ENSMUST00000191736 523 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm37682-201ENSMUST00000191776 522 ntBASIC5.63□□□□□ -1.51
Ccdc40Q8BI79 Gm18553-201ENSMUST00000194152 634 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms