Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm28768-201ENSMUST00000189034 378 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm8009-201ENSMUST00000191672 436 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm18407-201ENSMUST00000192126 790 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm36638-201ENSMUST00000193295 400 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm37889-201ENSMUST00000194174 251 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm43576-201ENSMUST00000197937 871 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm43171-201ENSMUST00000199882 291 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm44108-201ENSMUST00000203525 422 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm44075-201ENSMUST00000204208 216 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm2544-201ENSMUST00000222702 756 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm42536-201ENSMUST00000197562 1613 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.09□□□□□ -1.43
Scaf4Q6PFF0 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
Scaf4Q6PFF0 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm38362-201ENSMUST00000192999 2064 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm38090-201ENSMUST00000195733 1942 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm12873-201ENSMUST00000119988 422 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm11410-201ENSMUST00000120053 1143 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm13593-201ENSMUST00000121329 692 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm15157-201ENSMUST00000121852 702 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm25435-201ENSMUST00000158277 267 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm24157-201ENSMUST00000175265 111 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm16531-201ENSMUST00000180658 967 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm1972-201ENSMUST00000181606 964 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Mir8105-201ENSMUST00000184718 89 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm29534-201ENSMUST00000187328 382 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm18971-201ENSMUST00000197240 374 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm44252-201ENSMUST00000204187 330 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm45628-201ENSMUST00000210849 274 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm7495-201ENSMUST00000215099 426 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm19056-201ENSMUST00000218220 797 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm29809-201ENSMUST00000218423 493 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm46364-201ENSMUST00000218548 319 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 AC167977.1-201ENSMUST00000221384 234 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Gm9762-201ENSMUST00000036976 444 ntBASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Scaf4Q6PFF0 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms