Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Foxc1Q61572 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Foxc1Q61572 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Foxc1Q61572 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.59□□□□□ -1.51
Foxc1Q61572 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.59□□□□□ -1.51
Foxc1Q61572 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC5.59□□□□□ -1.51
Foxc1Q61572 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Foxc1Q61572 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Foxc1Q61572 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Foxc1Q61572 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Foxc1Q61572 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC5.59□□□□□ -1.51
Foxc1Q61572 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Foxc1Q61572 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Foxc1Q61572 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Foxc1Q61572 Grik1-210ENSMUST00000228034 2708 ntBASIC5.59□□□□□ -1.52
Foxc1Q61572 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
Foxc1Q61572 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Foxc1Q61572 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC5.59□□□□□ -1.52
Foxc1Q61572 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Foxc1Q61572 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Foxc1Q61572 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
Foxc1Q61572 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 AC158686.1-201ENSMUST00000218068 2332 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm43707-201ENSMUST00000196451 3187 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm25097-201ENSMUST00000104042 145 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm12235-201ENSMUST00000118596 170 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm3943-201ENSMUST00000118606 718 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm14933-201ENSMUST00000118840 481 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm11903-201ENSMUST00000118958 727 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm15843-201ENSMUST00000146593 529 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm23663-201ENSMUST00000158045 80 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm4904-201ENSMUST00000178243 1195 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm21959-201ENSMUST00000178439 452 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm23793-201ENSMUST00000179396 117 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm8305-201ENSMUST00000180022 1195 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Mir6238-201ENSMUST00000184140 129 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm36961-201ENSMUST00000191980 132 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm43315-201ENSMUST00000198120 313 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm45299-201ENSMUST00000210199 420 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 AC102582.1-201ENSMUST00000215376 378 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm4898-201ENSMUST00000218519 832 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm9315-201ENSMUST00000222696 908 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Foxc1Q61572 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Snord68-201ENSMUST00000082516 86 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Rny1-201ENSMUST00000083767 112 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm45838-201ENSMUST00000207355 2447 ntBASIC5.58□□□□□ -1.52
Foxc1Q61572 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Foxc1Q61572 Gm10743-201ENSMUST00000219611 2358 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms