Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm25037-201ENSMUST00000175418 110 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm22111-201ENSMUST00000178010 79 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm23687-201ENSMUST00000178664 79 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm24566-201ENSMUST00000179286 79 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm23305-201ENSMUST00000179342 79 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm26389-201ENSMUST00000179819 79 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm22130-201ENSMUST00000179979 79 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm22393-201ENSMUST00000180153 79 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm25085-201ENSMUST00000180298 79 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Mir7653-201ENSMUST00000184358 61 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm18150-201ENSMUST00000195341 645 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm43743-202ENSMUST00000198353 491 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm42824-201ENSMUST00000199361 247 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm43232-201ENSMUST00000201346 364 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 AC110380.1-201ENSMUST00000226987 389 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm24041-201ENSMUST00000083115 156 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm22578-201ENSMUST00000083730 107 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Olfr467-201ENSMUST00000084756 927 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm14988-201ENSMUST00000117224 1548 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp39Q3TIX9 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Igkv11-106-201ENSMUST00000103331 346 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm14621-201ENSMUST00000117709 689 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm13607-201ENSMUST00000117875 539 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm11420-201ENSMUST00000120047 402 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm14898-201ENSMUST00000120202 645 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm12308-201ENSMUST00000120440 389 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm13459-201ENSMUST00000121558 646 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm24719-201ENSMUST00000157520 110 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20401-201ENSMUST00000173717 212 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20480-201ENSMUST00000173953 250 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm26194-201ENSMUST00000175036 71 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Rab26os-201ENSMUST00000176215 477 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Mir6971-201ENSMUST00000183497 63 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20885-201ENSMUST00000190192 654 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm18407-201ENSMUST00000192126 790 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm38261-201ENSMUST00000192608 316 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm29740-201ENSMUST00000193182 655 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm36866-201ENSMUST00000193343 657 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm36047-201ENSMUST00000193659 657 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm7897-201ENSMUST00000193981 554 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20857-201ENSMUST00000194766 657 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm20858-201ENSMUST00000195459 657 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm43467-201ENSMUST00000197441 437 ntBASIC5.72□□□□□ -1.49
Usp39Q3TIX9 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.72□□□□□ -1.49
Usp39Q3TIX9 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms