Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC3.47□□□□□ -1.85
PrkdcP97313 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm23593-201ENSMUST00000104309 120 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm23905-201ENSMUST00000157568 109 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Mir6344-201ENSMUST00000183462 104 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Gm43136-201ENSMUST00000200403 636 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.47□□□□□ -1.85
PrkdcP97313 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PrkdcP97313 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
PrkdcP97313 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PrkdcP97313 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC3.47□□□□□ -1.85
PrkdcP97313 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PrkdcP97313 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PrkdcP97313 Gm15923-201ENSMUST00000119300 1169 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Gm16456-201ENSMUST00000174431 920 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Gm37123-201ENSMUST00000192994 1171 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Gm9134-201ENSMUST00000193186 551 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
PrkdcP97313 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
PrkdcP97313 Gm44412-201ENSMUST00000203018 294 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
PrkdcP97313 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
PrkdcP97313 AC155167.2-201ENSMUST00000226127 1945 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Gm19113-201ENSMUST00000217552 1828 ntBASIC3.46□□□□□ -1.85
PrkdcP97313 Gm29325-201ENSMUST00000190705 2528 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PrkdcP97313 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PrkdcP97313 Grk1-202ENSMUST00000209909 7431 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 Grk1-201ENSMUST00000033827 7425 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm12332-201ENSMUST00000121397 922 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm29240-201ENSMUST00000187248 286 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm4501-201ENSMUST00000207330 551 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm4558-201ENSMUST00000207886 521 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm5338-201ENSMUST00000209530 639 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 AC141425.1-201ENSMUST00000224989 265 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PrkdcP97313 n-R5s65-201ENSMUST00000082614 117 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC3.46□□□□□ -1.86
PrkdcP97313 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 AC144772.2-201ENSMUST00000228830 2859 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm36963-201ENSMUST00000193506 2324 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 AC124556.1-201ENSMUST00000218256 1319 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm25168-201ENSMUST00000104189 132 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Defa-ps14-201ENSMUST00000121373 418 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm15790-201ENSMUST00000161109 1251 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm26828-201ENSMUST00000180640 172 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm27193-201ENSMUST00000184217 586 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm43968-201ENSMUST00000203388 389 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Gm23464-201ENSMUST00000083145 147 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Mir194-1-201ENSMUST00000083647 67 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 n-R5s170-201ENSMUST00000083726 113 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC3.46□□□□□ -1.86
PrkdcP97313 Gm18259-201ENSMUST00000220991 2010 ntBASIC3.46□□□□□ -1.86
PrkdcP97313 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms