Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Shmt1P50431 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm8614-201ENSMUST00000182528 978 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Gm27855-201ENSMUST00000184122 128 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm4859-201ENSMUST00000199625 787 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Gm44212-201ENSMUST00000205016 897 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Gm45070-201ENSMUST00000208100 246 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Gm45458-201ENSMUST00000209900 522 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Gm4032-201ENSMUST00000210886 487 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm46192-201ENSMUST00000217894 326 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm4012-201ENSMUST00000221504 581 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Shmt1P50431 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Shmt1P50431 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Shmt1P50431 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.11□□□□□ -1.43
Shmt1P50431 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Shmt1P50431 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.11□□□□□ -1.43
Shmt1P50431 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Shmt1P50431 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Shmt1P50431 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm37086-201ENSMUST00000193082 3452 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm19125-201ENSMUST00000188408 1383 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Shmt1P50431 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm6806-201ENSMUST00000120092 1006 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm14998-201ENSMUST00000120502 495 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm12313-201ENSMUST00000121347 421 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm12005-201ENSMUST00000121451 379 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm14122-201ENSMUST00000122076 973 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm15187-201ENSMUST00000122329 264 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm6081-201ENSMUST00000134472 489 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Shmt1P50431 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm25152-201ENSMUST00000157117 114 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm24692-201ENSMUST00000157761 146 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm20453-201ENSMUST00000173968 226 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.1□□□□□ -1.43
Shmt1P50431 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm9480-201ENSMUST00000198038 616 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm42652-201ENSMUST00000199073 614 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm18861-201ENSMUST00000202509 1186 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.1□□□□□ -1.43
Shmt1P50431 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.1□□□□□ -1.43
Shmt1P50431 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 AC107663.3-201ENSMUST00000225873 601 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Shmt1P50431 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Shmt1P50431 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Shmt1P50431 Gm23795-201ENSMUST00000084006 137 ntBASIC6.1□□□□□ -1.43
Shmt1P50431 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Shmt1P50431 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.1□□□□□ -1.43
Shmt1P50431 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Shmt1P50431 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Shmt1P50431 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Shmt1P50431 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.1□□□□□ -1.43
Shmt1P50431 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Shmt1P50431 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Shmt1P50431 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms